BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A01SP1|AL430631
(710 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1228 381 e-105
>3x_Contig1228
Length = 5992
Score = 381 bits (191), Expect = e-105
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1 gatccaaacaatcccacaaatctattgttcttcatcgaaccttcagcggtaacaaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4207 gatccaaacaatcccacaaatctattgttcttcatcgaaccttcagcggtaacaaagcac 4266
Query: 61 gtctgttttgaacgagagccagtaatcttcctagtctgcgacatgactaaacaagcgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4267 gtctgttttgaacgagagccagtaatcttcctagtctgcgacatgactaaacaagcgtca 4326
Query: 121 atgaattgattcgcatgtggtgcacacacaaggatcgttggggtattttttgtggggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4327 atgaattgattcgcatgtggtgcacacacaaggatcgttggggtattttttgtggggaca 4386
Query: 181 tggtacgaacc 191
|||||||||||
Sbjct: 4387 tggtacgaacc 4397
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4177
Number of Sequences: 1807
Number of extensions: 4177
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 710
length of database: 10,358,551
effective HSP length: 16
effective length of query: 694
effective length of database: 10,329,639
effective search space: 7168769466
effective search space used: 7168769466
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)